Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 FAM86EP-206ENST00000510506 987 ntBASIC21.62■■□□□ 1.05
VTA1Q9NP79 NEK4P2-201ENST00000580004 1012 ntBASIC21.62■■□□□ 1.05
VTA1Q9NP79 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
VTA1Q9NP79 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.62■■□□□ 1.05
VTA1Q9NP79 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.62■■□□□ 1.05
VTA1Q9NP79 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTA1Q9NP79 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.62■■□□□ 1.05
VTA1Q9NP79 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTA1Q9NP79 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTA1Q9NP79 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTA1Q9NP79 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VTA1Q9NP79 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTA1Q9NP79 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.61■■□□□ 1.05
VTA1Q9NP79 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTA1Q9NP79 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTA1Q9NP79 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VTA1Q9NP79 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VTA1Q9NP79 AC099778.1-201ENST00000568593 1911 ntBASIC21.61■■□□□ 1.05
VTA1Q9NP79 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTA1Q9NP79 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.61■■□□□ 1.05
VTA1Q9NP79 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VTA1Q9NP79 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.61■■□□□ 1.05
VTA1Q9NP79 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.61■■□□□ 1.05
VTA1Q9NP79 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
VTA1Q9NP79 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.61■■□□□ 1.05
VTA1Q9NP79 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.61■■□□□ 1.05
VTA1Q9NP79 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTA1Q9NP79 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTA1Q9NP79 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTA1Q9NP79 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTA1Q9NP79 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.6■■□□□ 1.05
VTA1Q9NP79 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VTA1Q9NP79 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VTA1Q9NP79 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTA1Q9NP79 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTA1Q9NP79 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTA1Q9NP79 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTA1Q9NP79 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTA1Q9NP79 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
VTA1Q9NP79 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTA1Q9NP79 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
VTA1Q9NP79 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
VTA1Q9NP79 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.59■■□□□ 1.05
VTA1Q9NP79 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.59■■□□□ 1.05
VTA1Q9NP79 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
VTA1Q9NP79 PCED1CP-201ENST00000419887 785 ntBASIC21.59■■□□□ 1.05
VTA1Q9NP79 AC009947.2-201ENST00000444014 672 ntBASIC21.59■■□□□ 1.05
VTA1Q9NP79 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.59■■□□□ 1.05
VTA1Q9NP79 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.59■■□□□ 1.05
VTA1Q9NP79 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.59■■□□□ 1.05
VTA1Q9NP79 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.59■■□□□ 1.05
VTA1Q9NP79 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.59■■□□□ 1.05
VTA1Q9NP79 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTA1Q9NP79 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTA1Q9NP79 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTA1Q9NP79 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
VTA1Q9NP79 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.59■■□□□ 1.05
VTA1Q9NP79 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTA1Q9NP79 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTA1Q9NP79 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
VTA1Q9NP79 ZNF815P-204ENST00000434898 1737 ntBASIC21.58■■□□□ 1.05
VTA1Q9NP79 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VTA1Q9NP79 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.58■■□□□ 1.05
VTA1Q9NP79 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
VTA1Q9NP79 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTA1Q9NP79 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.58■■□□□ 1.05
VTA1Q9NP79 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTA1Q9NP79 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTA1Q9NP79 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.58■■□□□ 1.05
VTA1Q9NP79 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTA1Q9NP79 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTA1Q9NP79 KRT18P38-201ENST00000449496 1282 ntBASIC21.58■■□□□ 1.05
VTA1Q9NP79 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.58■■□□□ 1.05
VTA1Q9NP79 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VTA1Q9NP79 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.58■■□□□ 1.04
VTA1Q9NP79 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
VTA1Q9NP79 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
VTA1Q9NP79 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.58■■□□□ 1.04
VTA1Q9NP79 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
VTA1Q9NP79 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
VTA1Q9NP79 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VTA1Q9NP79 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.58■■□□□ 1.04
VTA1Q9NP79 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VTA1Q9NP79 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
VTA1Q9NP79 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
VTA1Q9NP79 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms