Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GCM1Q9NP62 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.5■□□□□ 0.23
GCM1Q9NP62 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 MIR718-201ENST00000390190 70 ntBASIC16.49■□□□□ 0.23
GCM1Q9NP62 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 AC012618.2-201ENST00000428058 849 ntBASIC16.49■□□□□ 0.23
GCM1Q9NP62 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 AC093827.2-201ENST00000512654 315 ntBASIC16.49■□□□□ 0.23
GCM1Q9NP62 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 AF186192.3-201ENST00000583427 947 ntBASIC16.49■□□□□ 0.23
GCM1Q9NP62 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 Z99916.2-201ENST00000604037 246 ntBASIC16.49■□□□□ 0.23
GCM1Q9NP62 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
GCM1Q9NP62 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GCM1Q9NP62 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
GCM1Q9NP62 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.48■□□□□ 0.23
GCM1Q9NP62 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.48■□□□□ 0.23
GCM1Q9NP62 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.48■□□□□ 0.23
GCM1Q9NP62 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.48■□□□□ 0.23
GCM1Q9NP62 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GCM1Q9NP62 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.48■□□□□ 0.23
GCM1Q9NP62 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.48■□□□□ 0.23
GCM1Q9NP62 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 RPS2P4-201ENST00000476944 856 ntBASIC16.48■□□□□ 0.23
GCM1Q9NP62 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.48■□□□□ 0.23
GCM1Q9NP62 AC233702.5-201ENST00000584107 538 ntBASIC16.48■□□□□ 0.23
GCM1Q9NP62 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.48■□□□□ 0.23
GCM1Q9NP62 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
GCM1Q9NP62 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GCM1Q9NP62 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
GCM1Q9NP62 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 AP002982.1-201ENST00000492365 877 ntBASIC16.47■□□□□ 0.23
GCM1Q9NP62 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 AP001412.1-201ENST00000608405 714 ntBASIC16.47■□□□□ 0.23
GCM1Q9NP62 AL353708.3-201ENST00000610272 989 ntBASIC16.47■□□□□ 0.23
GCM1Q9NP62 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
GCM1Q9NP62 AC125437.2-201ENST00000625180 2167 ntBASIC16.47■□□□□ 0.23
GCM1Q9NP62 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GCM1Q9NP62 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms