Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 AL020996.1-203ENST00000536896 2307 ntBASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC40Q9H9A6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 SDHAP1-207ENST00000440850 2000 ntBASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 AC004264.1-201ENST00000608354 794 ntBASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC40Q9H9A6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC40Q9H9A6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC40Q9H9A6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC40Q9H9A6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.58■□□□□ 0.73
LRRC40Q9H9A6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC40Q9H9A6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRC40Q9H9A6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
LRRC40Q9H9A6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
LRRC40Q9H9A6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC40Q9H9A6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC40Q9H9A6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC40Q9H9A6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC40Q9H9A6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.58■□□□□ 0.72
LRRC40Q9H9A6 ESRRAP1-201ENST00000400596 1257 ntBASIC19.58■□□□□ 0.72
LRRC40Q9H9A6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.58■□□□□ 0.72
LRRC40Q9H9A6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.58■□□□□ 0.72
LRRC40Q9H9A6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
LRRC40Q9H9A6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.58■□□□□ 0.72
LRRC40Q9H9A6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.58■□□□□ 0.72
LRRC40Q9H9A6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC40Q9H9A6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC40Q9H9A6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC40Q9H9A6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC40Q9H9A6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 AC233263.1-201ENST00000578059 224 ntBASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 AC004408.2-201ENST00000623613 2777 ntBASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC40Q9H9A6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms