Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 KRT18P16-201ENST00000510337 1294 ntBASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 MIR4758-201ENST00000577688 71 ntBASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 AC083880.1-201ENST00000608266 535 ntBASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TUBB1Q9H4B7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 AC060766.5-201ENST00000590539 871 ntBASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 AC120498.8-201ENST00000614275 531 ntBASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB1Q9H4B7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 AC093525.10-201ENST00000625130 1569 ntBASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TUBB1Q9H4B7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TUBB1Q9H4B7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TUBB1Q9H4B7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TUBB1Q9H4B7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TUBB1Q9H4B7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 AL138781.1-201ENST00000566567 1274 ntBASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB1Q9H4B7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TUBB1Q9H4B7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TUBB1Q9H4B7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.57■□□□□ 0.56
TUBB1Q9H4B7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.57■□□□□ 0.56
TUBB1Q9H4B7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms