Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 MIR4497-201ENST00000583208 89 ntBASIC17.89■□□□□ 0.45
UBQLN3Q9H347 AL049637.2-201ENST00000641778 930 ntBASIC17.89■□□□□ 0.45
UBQLN3Q9H347 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.89■□□□□ 0.45
UBQLN3Q9H347 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 AP001412.1-201ENST00000608405 714 ntBASIC17.88■□□□□ 0.45
UBQLN3Q9H347 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 HTR7P1-201ENST00000538670 1336 ntBASIC17.88■□□□□ 0.45
UBQLN3Q9H347 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN3Q9H347 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 YBX1P10-201ENST00000444752 975 ntBASIC17.87■□□□□ 0.45
UBQLN3Q9H347 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN3Q9H347 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.86■□□□□ 0.45
UBQLN3Q9H347 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 AL353807.1-201ENST00000427475 662 ntBASIC17.86■□□□□ 0.45
UBQLN3Q9H347 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 SNORA78-201ENST00000459373 127 ntBASIC17.86■□□□□ 0.45
UBQLN3Q9H347 AF186192.3-201ENST00000583427 947 ntBASIC17.86■□□□□ 0.45
UBQLN3Q9H347 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 AC113410.3-201ENST00000623366 203 ntBASIC17.86■□□□□ 0.45
UBQLN3Q9H347 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms