Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
VCX3BQ9H321 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.39■□□□□ 0.53
VCX3BQ9H321 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
VCX3BQ9H321 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VCX3BQ9H321 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCX3BQ9H321 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCX3BQ9H321 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCX3BQ9H321 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCX3BQ9H321 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCX3BQ9H321 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VCX3BQ9H321 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.38■□□□□ 0.53
VCX3BQ9H321 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCX3BQ9H321 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
VCX3BQ9H321 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.38■□□□□ 0.53
VCX3BQ9H321 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.38■□□□□ 0.53
VCX3BQ9H321 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.38■□□□□ 0.53
VCX3BQ9H321 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.38■□□□□ 0.53
VCX3BQ9H321 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VCX3BQ9H321 KRT16P2-201ENST00000414673 1423 ntBASIC18.38■□□□□ 0.53
VCX3BQ9H321 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCX3BQ9H321 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VCX3BQ9H321 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VCX3BQ9H321 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCX3BQ9H321 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VCX3BQ9H321 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCX3BQ9H321 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VCX3BQ9H321 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCX3BQ9H321 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VCX3BQ9H321 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCX3BQ9H321 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCX3BQ9H321 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VCX3BQ9H321 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCX3BQ9H321 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 KRT16P6-202ENST00000425692 1426 ntBASIC18.37■□□□□ 0.53
VCX3BQ9H321 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.37■□□□□ 0.53
VCX3BQ9H321 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCX3BQ9H321 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCX3BQ9H321 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VCX3BQ9H321 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCX3BQ9H321 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCX3BQ9H321 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCX3BQ9H321 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCX3BQ9H321 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCX3BQ9H321 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCX3BQ9H321 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VCX3BQ9H321 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.36■□□□□ 0.53
VCX3BQ9H321 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.36■□□□□ 0.53
VCX3BQ9H321 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCX3BQ9H321 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
VCX3BQ9H321 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
VCX3BQ9H321 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
VCX3BQ9H321 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.36■□□□□ 0.53
VCX3BQ9H321 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.36■□□□□ 0.53
VCX3BQ9H321 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
VCX3BQ9H321 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.36■□□□□ 0.53
VCX3BQ9H321 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCX3BQ9H321 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VCX3BQ9H321 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
VCX3BQ9H321 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCX3BQ9H321 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 AC009053.2-201ENST00000563701 2365 ntBASIC18.35■□□□□ 0.53
VCX3BQ9H321 AC067852.2-201ENST00000590513 2313 ntBASIC18.35■□□□□ 0.53
VCX3BQ9H321 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 AC011270.2-201ENST00000624293 2550 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms