Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC68Q9H2F9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC68Q9H2F9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC68Q9H2F9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC68Q9H2F9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC68Q9H2F9 Z82202.1-201ENST00000623446 1880 ntBASIC19.33■□□□□ 0.69
CCDC68Q9H2F9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC68Q9H2F9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC68Q9H2F9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC68Q9H2F9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 POM121L13P-201ENST00000422362 380 ntBASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
CCDC68Q9H2F9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 AL032819.2-201ENST00000624543 2162 ntBASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC68Q9H2F9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 HTR7P1-202ENST00000624664 4411 ntBASIC19.31■□□□□ 0.68
CCDC68Q9H2F9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 TUBB8P6-201ENST00000436895 1288 ntBASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 KRT8P8-201ENST00000434750 1448 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms