Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 AL121906.2-201ENST00000621597 723 ntBASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.83■□□□□ 0.44
POLR2J3Q9H1A7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 YBX1P10-201ENST00000444752 975 ntBASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 IKBKGP1-201ENST00000612193 1073 ntBASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 AC141586.3-201ENST00000562166 1838 ntBASIC17.82■□□□□ 0.44
POLR2J3Q9H1A7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 AL161938.1-201ENST00000569833 2180 ntBASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 CROCCP3-202ENST00000420820 1947 ntBASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 SLC29A4P1-201ENST00000398760 971 ntBASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 AC006970.2-201ENST00000450065 779 ntBASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 AC083906.2-201ENST00000511578 360 ntBASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 HLA-B-256ENST00000639848 1089 ntBASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR2J3Q9H1A7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 MIR4758-201ENST00000577688 71 ntBASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms