Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF4Q9BUZ4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF4Q9BUZ4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAF4Q9BUZ4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF4Q9BUZ4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 AC012618.2-201ENST00000428058 849 ntBASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF4Q9BUZ4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 AC110285.5-201ENST00000611501 352 ntBASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAF4Q9BUZ4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 AL390961.4-201ENST00000623958 2535 ntBASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 KRASP1-201ENST00000407852 552 ntBASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 AC233702.5-201ENST00000584107 538 ntBASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAF4Q9BUZ4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAF4Q9BUZ4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms