Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
YIPF4Q9BSR8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
YIPF4Q9BSR8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 AP003097.1-201ENST00000530657 1135 ntBASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 AC006058.3-201ENST00000606217 1069 ntBASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.14■□□□□ 0.49
YIPF4Q9BSR8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 ZNF815P-204ENST00000434898 1737 ntBASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 AL158047.1-201ENST00000445918 881 ntBASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
YIPF4Q9BSR8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 AC233263.1-201ENST00000578059 224 ntBASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 KRT8P8-201ENST00000434750 1448 ntBASIC18.12■□□□□ 0.49
YIPF4Q9BSR8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms