Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 AC120498.9-201ENST00000339021 3867 ntBASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM56Q9BRZ2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 MIR4758-201ENST00000577688 71 ntBASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM56Q9BRZ2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM56Q9BRZ2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM56Q9BRZ2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.64■□□□□ 0.74
TRIM56Q9BRZ2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM56Q9BRZ2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM56Q9BRZ2 AL161938.1-201ENST00000569833 2180 ntBASIC19.64■□□□□ 0.74
TRIM56Q9BRZ2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM56Q9BRZ2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM56Q9BRZ2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM56Q9BRZ2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 AL355802.2-201ENST00000402069 882 ntBASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 AC097658.1-201ENST00000475555 843 ntBASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM56Q9BRZ2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM56Q9BRZ2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM56Q9BRZ2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRIM56Q9BRZ2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRIM56Q9BRZ2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM56Q9BRZ2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM56Q9BRZ2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM56Q9BRZ2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM56Q9BRZ2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM56Q9BRZ2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM56Q9BRZ2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms