Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 KRT18P5-201ENST00000436075 1291 ntBASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 OR10C1-204ENST00000622521 1039 ntBASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 AC018553.1-201ENST00000616682 1458 ntBASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.47■□□□□ 0.23
CMSS1Q9BQ75 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 AC007322.1-201ENST00000426983 750 ntBASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CMSS1Q9BQ75 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
CMSS1Q9BQ75 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CMSS1Q9BQ75 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CMSS1Q9BQ75 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 BID-214ENST00000617586 542 ntTSL 5 BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 KRT17P1-201ENST00000399211 1546 ntBASIC16.45■□□□□ 0.22
CMSS1Q9BQ75 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 AC006015.1-201ENST00000429970 570 ntBASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 AL049812.1-201ENST00000432563 2267 ntBASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMSS1Q9BQ75 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms