Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.86■□□□□ 0.61
NPAS2Q99743 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 AC008403.3-201ENST00000598924 454 ntBASIC18.86■□□□□ 0.61
NPAS2Q99743 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NPAS2Q99743 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPAS2Q99743 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.85■□□□□ 0.61
NPAS2Q99743 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS2Q99743 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS2Q99743 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NPAS2Q99743 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NPAS2Q99743 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS2Q99743 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS2Q99743 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS2Q99743 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS2Q99743 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS2Q99743 AC104581.1-202ENST00000635932 2618 ntBASIC18.85■□□□□ 0.61
NPAS2Q99743 AC026366.1-201ENST00000488803 879 ntBASIC18.85■□□□□ 0.61
NPAS2Q99743 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.85■□□□□ 0.61
NPAS2Q99743 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NPAS2Q99743 AL031963.3-201ENST00000606441 850 ntBASIC18.85■□□□□ 0.61
NPAS2Q99743 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.85■□□□□ 0.61
NPAS2Q99743 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS2Q99743 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NPAS2Q99743 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS2Q99743 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS2Q99743 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NPAS2Q99743 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
NPAS2Q99743 LETM1P2-201ENST00000597330 2178 ntBASIC18.85■□□□□ 0.61
NPAS2Q99743 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS2Q99743 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NPAS2Q99743 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NPAS2Q99743 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 AIRN-201ENST00000601203 4374 ntBASIC18.84■□□□□ 0.61
NPAS2Q99743 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NPAS2Q99743 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.84■□□□□ 0.61
NPAS2Q99743 AC098590.1-201ENST00000468126 897 ntBASIC18.84■□□□□ 0.61
NPAS2Q99743 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.84■□□□□ 0.61
NPAS2Q99743 AP003097.1-201ENST00000530657 1135 ntBASIC18.84■□□□□ 0.61
NPAS2Q99743 PNMA6B-201ENST00000538162 1200 ntBASIC18.84■□□□□ 0.61
NPAS2Q99743 C2orf69P4-201ENST00000565394 541 ntBASIC18.84■□□□□ 0.61
NPAS2Q99743 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.84■□□□□ 0.61
NPAS2Q99743 AC006058.3-201ENST00000606217 1069 ntBASIC18.84■□□□□ 0.61
NPAS2Q99743 AC066615.1-201ENST00000640911 628 ntBASIC18.84■□□□□ 0.61
NPAS2Q99743 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS2Q99743 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS2Q99743 AL049812.1-201ENST00000432563 2267 ntBASIC18.84■□□□□ 0.61
NPAS2Q99743 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.84■□□□□ 0.61
NPAS2Q99743 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.83■□□□□ 0.61
NPAS2Q99743 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS2Q99743 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS2Q99743 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.83■□□□□ 0.61
NPAS2Q99743 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS2Q99743 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.83■□□□□ 0.61
NPAS2Q99743 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS2Q99743 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NPAS2Q99743 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
NPAS2Q99743 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS2Q99743 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS2Q99743 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS2Q99743 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS2Q99743 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NPAS2Q99743 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS2Q99743 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS2Q99743 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.83■□□□□ 0.6
NPAS2Q99743 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.83■□□□□ 0.6
NPAS2Q99743 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NPAS2Q99743 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS2Q99743 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS2Q99743 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.83■□□□□ 0.6
NPAS2Q99743 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS2Q99743 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.83■□□□□ 0.6
NPAS2Q99743 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS2Q99743 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.83■□□□□ 0.6
NPAS2Q99743 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS2Q99743 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NPAS2Q99743 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS2Q99743 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS2Q99743 KRT8P20-201ENST00000423953 1409 ntBASIC18.83■□□□□ 0.6
NPAS2Q99743 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS2Q99743 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS2Q99743 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms