Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 ANO7L1-203ENST00000602586 1720 ntBASIC16.61■□□□□ 0.25
CMTM3Q96MX0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CMTM3Q96MX0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 AC096631.2-201ENST00000436136 790 ntBASIC16.6■□□□□ 0.25
CMTM3Q96MX0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 AC073592.3-201ENST00000625118 1834 ntBASIC16.6■□□□□ 0.25
CMTM3Q96MX0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CMTM3Q96MX0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 TERF1P5-201ENST00000477545 1207 ntBASIC16.59■□□□□ 0.25
CMTM3Q96MX0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 AC083906.6-201ENST00000641366 219 ntBASIC16.59■□□□□ 0.25
CMTM3Q96MX0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.59■□□□□ 0.25
CMTM3Q96MX0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CMTM3Q96MX0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.58■□□□□ 0.25
CMTM3Q96MX0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.58■□□□□ 0.25
CMTM3Q96MX0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CMTM3Q96MX0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CMTM3Q96MX0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CMTM3Q96MX0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CMTM3Q96MX0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.58■□□□□ 0.25
CMTM3Q96MX0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CMTM3Q96MX0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CMTM3Q96MX0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CMTM3Q96MX0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.58■□□□□ 0.24
CMTM3Q96MX0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.58■□□□□ 0.24
CMTM3Q96MX0 AC007322.4-201ENST00000509611 723 ntBASIC16.58■□□□□ 0.24
CMTM3Q96MX0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.58■□□□□ 0.24
CMTM3Q96MX0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.58■□□□□ 0.24
CMTM3Q96MX0 AL031432.3-201ENST00000607698 485 ntBASIC16.58■□□□□ 0.24
CMTM3Q96MX0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CMTM3Q96MX0 FEM1AP3-201ENST00000403722 1741 ntBASIC16.58■□□□□ 0.24
CMTM3Q96MX0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CMTM3Q96MX0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.58■□□□□ 0.24
CMTM3Q96MX0 AC020763.4-201ENST00000623414 4170 ntBASIC16.58■□□□□ 0.24
CMTM3Q96MX0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CMTM3Q96MX0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CMTM3Q96MX0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMTM3Q96MX0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMTM3Q96MX0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMTM3Q96MX0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CMTM3Q96MX0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms