Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX27Q96L92 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNX27Q96L92 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX27Q96L92 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX27Q96L92 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX27Q96L92 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX27Q96L92 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX27Q96L92 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.86■□□□□ 0.93
SNX27Q96L92 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.86■□□□□ 0.93
SNX27Q96L92 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SNX27Q96L92 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX27Q96L92 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX27Q96L92 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SNX27Q96L92 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNX27Q96L92 LINC01568-207ENST00000641790 1380 ntBASIC20.85■□□□□ 0.93
SNX27Q96L92 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SNX27Q96L92 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.85■□□□□ 0.93
SNX27Q96L92 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNX27Q96L92 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX27Q96L92 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.85■□□□□ 0.93
SNX27Q96L92 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.85■□□□□ 0.93
SNX27Q96L92 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.85■□□□□ 0.93
SNX27Q96L92 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX27Q96L92 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.85■□□□□ 0.93
SNX27Q96L92 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.85■□□□□ 0.93
SNX27Q96L92 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SNX27Q96L92 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX27Q96L92 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SNX27Q96L92 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.85■□□□□ 0.93
SNX27Q96L92 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX27Q96L92 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX27Q96L92 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.85■□□□□ 0.93
SNX27Q96L92 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNX27Q96L92 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SNX27Q96L92 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNX27Q96L92 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.84■□□□□ 0.93
SNX27Q96L92 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNX27Q96L92 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SNX27Q96L92 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNX27Q96L92 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNX27Q96L92 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.84■□□□□ 0.93
SNX27Q96L92 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.84■□□□□ 0.93
SNX27Q96L92 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.84■□□□□ 0.93
SNX27Q96L92 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.84■□□□□ 0.93
SNX27Q96L92 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNX27Q96L92 C2orf69P3-201ENST00000565542 1120 ntBASIC20.84■□□□□ 0.93
SNX27Q96L92 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNX27Q96L92 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNX27Q96L92 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.84■□□□□ 0.93
SNX27Q96L92 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SNX27Q96L92 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.84■□□□□ 0.93
SNX27Q96L92 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.84■□□□□ 0.93
SNX27Q96L92 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.84■□□□□ 0.93
SNX27Q96L92 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.84■□□□□ 0.93
SNX27Q96L92 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNX27Q96L92 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
SNX27Q96L92 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNX27Q96L92 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX27Q96L92 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX27Q96L92 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.83■□□□□ 0.93
SNX27Q96L92 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX27Q96L92 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX27Q96L92 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.83■□□□□ 0.93
SNX27Q96L92 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX27Q96L92 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX27Q96L92 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.83■□□□□ 0.93
SNX27Q96L92 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX27Q96L92 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SNX27Q96L92 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX27Q96L92 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SNX27Q96L92 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.83■□□□□ 0.93
SNX27Q96L92 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SNX27Q96L92 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.83■□□□□ 0.93
SNX27Q96L92 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.83■□□□□ 0.93
SNX27Q96L92 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX27Q96L92 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.83■□□□□ 0.92
SNX27Q96L92 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.92
SNX27Q96L92 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SNX27Q96L92 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNX27Q96L92 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SNX27Q96L92 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SNX27Q96L92 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SNX27Q96L92 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNX27Q96L92 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.82■□□□□ 0.92
SNX27Q96L92 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX27Q96L92 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX27Q96L92 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX27Q96L92 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.82■□□□□ 0.92
SNX27Q96L92 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
SNX27Q96L92 TSPY14P-201ENST00000303979 915 ntBASIC20.82■□□□□ 0.92
SNX27Q96L92 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.82■□□□□ 0.92
SNX27Q96L92 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNX27Q96L92 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
SNX27Q96L92 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX27Q96L92 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SNX27Q96L92 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX27Q96L92 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.82■□□□□ 0.92
SNX27Q96L92 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNX27Q96L92 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNX27Q96L92 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms