Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 AFG3L1P-217ENST00000557444 2447 ntBASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 SLC25A1P4-201ENST00000567977 778 ntBASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCD1Q96GM5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMARCD1Q96GM5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SMARCD1Q96GM5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.33■□□□□ 0.84
SMARCD1Q96GM5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SMARCD1Q96GM5 AC096733.2-201ENST00000609937 1394 ntBASIC20.33■□□□□ 0.84
SMARCD1Q96GM5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMARCD1Q96GM5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.33■□□□□ 0.84
SMARCD1Q96GM5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 CRYGFP-201ENST00000418459 633 ntBASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 SDHAP1-207ENST00000440850 2000 ntBASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMARCD1Q96GM5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 AL158211.5-201ENST00000623583 2518 ntBASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMARCD1Q96GM5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 KRT8P9-201ENST00000558927 1449 ntBASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 AC211429.1-201ENST00000415277 523 ntBASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 MFAP1P1-201ENST00000442257 1255 ntBASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCD1Q96GM5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms