Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.7■□□□□ 0.74
RTP4Q96DX8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.7■□□□□ 0.74
RTP4Q96DX8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTP4Q96DX8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTP4Q96DX8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTP4Q96DX8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTP4Q96DX8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTP4Q96DX8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTP4Q96DX8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
RTP4Q96DX8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTP4Q96DX8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTP4Q96DX8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.69■□□□□ 0.74
RTP4Q96DX8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
RTP4Q96DX8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RTP4Q96DX8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RTP4Q96DX8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTP4Q96DX8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTP4Q96DX8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.69■□□□□ 0.74
RTP4Q96DX8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RTP4Q96DX8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.68■□□□□ 0.74
RTP4Q96DX8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RTP4Q96DX8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RTP4Q96DX8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.68■□□□□ 0.74
RTP4Q96DX8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.68■□□□□ 0.74
RTP4Q96DX8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.68■□□□□ 0.74
RTP4Q96DX8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 AC142381.4-202ENST00000563973 229 ntBASIC19.68■□□□□ 0.74
RTP4Q96DX8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.68■□□□□ 0.74
RTP4Q96DX8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.68■□□□□ 0.74
RTP4Q96DX8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 AP006294.2-201ENST00000641667 209 ntBASIC19.68■□□□□ 0.74
RTP4Q96DX8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.68■□□□□ 0.74
RTP4Q96DX8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RTP4Q96DX8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 FEM1AP3-201ENST00000403722 1741 ntBASIC19.68■□□□□ 0.74
RTP4Q96DX8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTP4Q96DX8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 AC093525.10-201ENST00000625130 1569 ntBASIC19.67■□□□□ 0.74
RTP4Q96DX8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 AL158047.1-201ENST00000445918 881 ntBASIC19.67■□□□□ 0.74
RTP4Q96DX8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 C1QL1P1-201ENST00000568105 661 ntBASIC19.67■□□□□ 0.74
RTP4Q96DX8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RTP4Q96DX8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTP4Q96DX8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.66■□□□□ 0.74
RTP4Q96DX8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RTP4Q96DX8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
RTP4Q96DX8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.66■□□□□ 0.74
RTP4Q96DX8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.66■□□□□ 0.74
RTP4Q96DX8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.66■□□□□ 0.74
RTP4Q96DX8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTP4Q96DX8 PRKY-204ENST00000533551 1019 ntBASIC19.66■□□□□ 0.74
RTP4Q96DX8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms