Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB3Q92617 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NPIPB3Q92617 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB3Q92617 AL049812.1-201ENST00000432563 2267 ntBASIC15.23■□□□□ 0.03
NPIPB3Q92617 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NPIPB3Q92617 ZNF815P-204ENST00000434898 1737 ntBASIC15.23■□□□□ 0.03
NPIPB3Q92617 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.22■□□□□ 0.03
NPIPB3Q92617 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPB3Q92617 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB3Q92617 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NPIPB3Q92617 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NPIPB3Q92617 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
NPIPB3Q92617 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPB3Q92617 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.21■□□□□ 0.03
NPIPB3Q92617 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPB3Q92617 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 AC073210.2-201ENST00000430369 194 ntBASIC15.21■□□□□ 0.03
NPIPB3Q92617 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.21■□□□□ 0.03
NPIPB3Q92617 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 AL050303.2-201ENST00000619798 666 ntBASIC15.21■□□□□ 0.03
NPIPB3Q92617 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPIPB3Q92617 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPB3Q92617 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPB3Q92617 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPB3Q92617 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
NPIPB3Q92617 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.21■□□□□ 0.02
NPIPB3Q92617 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPB3Q92617 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
NPIPB3Q92617 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB3Q92617 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB3Q92617 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB3Q92617 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB3Q92617 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 AL138781.2-201ENST00000617896 1843 ntBASIC15.2■□□□□ 0.02
NPIPB3Q92617 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB3Q92617 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB3Q92617 CROCCP3-202ENST00000420820 1947 ntBASIC15.2■□□□□ 0.02
NPIPB3Q92617 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB3Q92617 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB3Q92617 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB3Q92617 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 CDCA4P2-201ENST00000441182 718 ntBASIC15.2■□□□□ 0.02
NPIPB3Q92617 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 AC006557.6-201ENST00000623071 864 ntBASIC15.2■□□□□ 0.02
NPIPB3Q92617 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NPIPB3Q92617 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPB3Q92617 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms