Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 ABALON-201ENST00000629058 1903 ntBASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 AC106820.2-201ENST00000563775 3264 ntBASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM11BQ8TCY0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 AL356652.1-201ENST00000615962 565 ntBASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 PRORSD1P-202ENST00000563365 2154 ntBASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SMIM11BQ8TCY0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.52□□□□□ -0.4
SMIM11BQ8TCY0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.52□□□□□ -0.4
SMIM11BQ8TCY0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM11BQ8TCY0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.52□□□□□ -0.4
SMIM11BQ8TCY0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM11BQ8TCY0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
SMIM11BQ8TCY0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM11BQ8TCY0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM11BQ8TCY0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.52□□□□□ -0.4
SMIM11BQ8TCY0 PTBP1P-201ENST00000554374 1601 ntBASIC12.52□□□□□ -0.4
SMIM11BQ8TCY0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
SMIM11BQ8TCY0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM11BQ8TCY0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 AC091799.1-201ENST00000422823 811 ntBASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM11BQ8TCY0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms