Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.72■□□□□ 0.91
LMO3Q8TAP4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LMO3Q8TAP4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LMO3Q8TAP4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LMO3Q8TAP4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LMO3Q8TAP4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 AC098590.1-201ENST00000468126 897 ntBASIC20.71■□□□□ 0.91
LMO3Q8TAP4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMO3Q8TAP4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LMO3Q8TAP4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 NIFKP9-201ENST00000419265 221 ntBASIC20.7■□□□□ 0.9
LMO3Q8TAP4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 HTR7P1-201ENST00000538670 1336 ntBASIC20.7■□□□□ 0.9
LMO3Q8TAP4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO3Q8TAP4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 KRT18P29-201ENST00000397031 1267 ntBASIC20.69■□□□□ 0.9
LMO3Q8TAP4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 RPS2P4-201ENST00000476944 856 ntBASIC20.69■□□□□ 0.9
LMO3Q8TAP4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 FEM1AP3-201ENST00000403722 1741 ntBASIC20.69■□□□□ 0.9
LMO3Q8TAP4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.69■□□□□ 0.9
LMO3Q8TAP4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMO3Q8TAP4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 ABHD17AP1-201ENST00000358206 933 ntBASIC20.68■□□□□ 0.9
LMO3Q8TAP4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 AC004980.1-204ENST00000429707 299 ntBASIC20.68■□□□□ 0.9
LMO3Q8TAP4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms