Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 TFP1-202ENST00000475455 1573 ntBASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 TNXA-203ENST00000507684 2038 ntBASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 RBM17P1-201ENST00000453646 1190 ntBASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 KRT18P21-201ENST00000515767 1272 ntBASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 REXO1L10P-201ENST00000615707 1290 ntBASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 KRT16P1-201ENST00000399124 1418 ntBASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 AP000974.1-201ENST00000623909 2387 ntBASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLDND2Q8NHS1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 UNC93B2-201ENST00000285383 730 ntBASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 YBX1P10-201ENST00000444752 975 ntBASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 C1QL1P1-201ENST00000568105 661 ntBASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 AC097493.4-201ENST00000641197 219 ntBASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 PHGDH-210ENST00000641115 1638 ntBASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLDND2Q8NHS1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 AC012306.2-201ENST00000609350 630 ntBASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDND2Q8NHS1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 AC079598.2-202ENST00000546624 1451 ntBASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms