Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 AL928921.2-201ENST00000641325 2442 ntBASIC12.15□□□□□ -0.46
SVIPQ8NHG7 AD000864.1-201ENST00000624076 2295 ntBASIC12.15□□□□□ -0.46
SVIPQ8NHG7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 AC005840.4-201ENST00000541242 2494 ntBASIC12.15□□□□□ -0.46
SVIPQ8NHG7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
SVIPQ8NHG7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SVIPQ8NHG7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SVIPQ8NHG7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SVIPQ8NHG7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SVIPQ8NHG7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
SVIPQ8NHG7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SVIPQ8NHG7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
SVIPQ8NHG7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
SVIPQ8NHG7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SVIPQ8NHG7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 AL391807.1-203ENST00000604392 2365 ntBASIC12.14□□□□□ -0.47
SVIPQ8NHG7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 CTH-203ENST00000411986 2044 ntTSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 YY2-201ENST00000429584 2741 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SVIPQ8NHG7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 AC006486.2-201ENST00000624246 2199 ntBASIC12.13□□□□□ -0.47
SVIPQ8NHG7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SVIPQ8NHG7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms