Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC25.87■■□□□ 1.73
COL22A1Q8NFW1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL22A1Q8NFW1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.87■■□□□ 1.73
COL22A1Q8NFW1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
COL22A1Q8NFW1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL22A1Q8NFW1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
COL22A1Q8NFW1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
COL22A1Q8NFW1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL22A1Q8NFW1 MIR574-201ENST00000385209 96 ntBASIC25.87■■□□□ 1.73
COL22A1Q8NFW1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC25.87■■□□□ 1.73
COL22A1Q8NFW1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC25.87■■□□□ 1.73
COL22A1Q8NFW1 RNF126P1-202ENST00000569893 925 ntBASIC25.87■■□□□ 1.73
COL22A1Q8NFW1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.86■■□□□ 1.73
COL22A1Q8NFW1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL22A1Q8NFW1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL22A1Q8NFW1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
COL22A1Q8NFW1 AC079776.4-201ENST00000511039 504 ntBASIC25.86■■□□□ 1.73
COL22A1Q8NFW1 AL136038.4-201ENST00000603606 1261 ntBASIC25.86■■□□□ 1.73
COL22A1Q8NFW1 AC138894.3-201ENST00000603787 634 ntBASIC25.86■■□□□ 1.73
COL22A1Q8NFW1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC25.86■■□□□ 1.73
COL22A1Q8NFW1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 MIR662-201ENST00000384847 95 ntBASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC25.85■■□□□ 1.73
COL22A1Q8NFW1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 AC074051.2-201ENST00000565115 352 ntBASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 GPAT2P1-201ENST00000444924 1672 ntBASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL22A1Q8NFW1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 AC104819.1-201ENST00000504587 486 ntBASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 AL157888.1-201ENST00000631930 593 ntBASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 IL9RP2-201ENST00000423948 1312 ntBASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL22A1Q8NFW1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
COL22A1Q8NFW1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 SLC25A1P1-201ENST00000528351 927 ntBASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 AC024243.1-201ENST00000609234 778 ntBASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 AL353801.3-201ENST00000609898 542 ntBASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.82■■□□□ 1.72
COL22A1Q8NFW1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
COL22A1Q8NFW1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC25.81■■□□□ 1.72
COL22A1Q8NFW1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC25.81■■□□□ 1.72
COL22A1Q8NFW1 SAPCD2P3-201ENST00000455031 850 ntBASIC25.81■■□□□ 1.72
COL22A1Q8NFW1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
COL22A1Q8NFW1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms