Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 HCG11-201ENST00000411553 5696 ntBASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 AL671277.2-201ENST00000458060 996 ntBASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF248Q8NDW4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 AC116351.2-201ENST00000606540 1585 ntBASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 TSPY17P-201ENST00000450329 467 ntBASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 LINC01521-201ENST00000504184 1943 ntBASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.44■□□□□ 0.54
ZNF248Q8NDW4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 AC140113.3-201ENST00000605663 199 ntBASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 AC069148.1-201ENST00000608741 768 ntBASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF248Q8NDW4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 TFP1-202ENST00000475455 1573 ntBASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 AC092338.2-201ENST00000568827 1415 ntBASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 CLEC4GP1-201ENST00000596555 870 ntBASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF248Q8NDW4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms