Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RNF169Q8NCN4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF169Q8NCN4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RNF169Q8NCN4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21■□□□□ 0.95
RNF169Q8NCN4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
RNF169Q8NCN4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RNF169Q8NCN4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21■□□□□ 0.95
RNF169Q8NCN4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF169Q8NCN4 HMGA1P5-201ENST00000412453 271 ntBASIC21■□□□□ 0.95
RNF169Q8NCN4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21■□□□□ 0.95
RNF169Q8NCN4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21■□□□□ 0.95
RNF169Q8NCN4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21■□□□□ 0.95
RNF169Q8NCN4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF169Q8NCN4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF169Q8NCN4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF169Q8NCN4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF169Q8NCN4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RNF169Q8NCN4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21■□□□□ 0.95
RNF169Q8NCN4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF169Q8NCN4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF169Q8NCN4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 AK4P3-201ENST00000418260 669 ntBASIC20.99■□□□□ 0.95
RNF169Q8NCN4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RNF169Q8NCN4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 SLC25A1P2-201ENST00000430693 912 ntBASIC20.98■□□□□ 0.95
RNF169Q8NCN4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
RNF169Q8NCN4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF169Q8NCN4 AL162377.1-201ENST00000618844 1793 ntBASIC20.97■□□□□ 0.95
RNF169Q8NCN4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF169Q8NCN4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF169Q8NCN4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RNF169Q8NCN4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF169Q8NCN4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF169Q8NCN4 BX664615.1-201ENST00000443558 458 ntBASIC20.97■□□□□ 0.95
RNF169Q8NCN4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
RNF169Q8NCN4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF169Q8NCN4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF169Q8NCN4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF169Q8NCN4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF169Q8NCN4 AC009237.14-201ENST00000609975 1594 ntBASIC20.97■□□□□ 0.95
RNF169Q8NCN4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF169Q8NCN4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 AC007663.1-201ENST00000438948 1240 ntBASIC20.96■□□□□ 0.95
RNF169Q8NCN4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 AC139887.4-201ENST00000607877 719 ntBASIC20.96■□□□□ 0.95
RNF169Q8NCN4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms