Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIML2Q8N7C3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIML2Q8N7C3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIML2Q8N7C3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIML2Q8N7C3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRIML2Q8N7C3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIML2Q8N7C3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TRIML2Q8N7C3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRIML2Q8N7C3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIML2Q8N7C3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIML2Q8N7C3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIML2Q8N7C3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 AC005181.1-201ENST00000604782 1256 ntBASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIML2Q8N7C3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 LSM12P1-201ENST00000411836 588 ntBASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 AC018470.1-201ENST00000624790 3129 ntBASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIML2Q8N7C3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 AC079598.2-202ENST00000546624 1451 ntBASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIML2Q8N7C3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms