Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PGBD3Q8N328 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD3Q8N328 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PGBD3Q8N328 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD3Q8N328 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PGBD3Q8N328 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD3Q8N328 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD3Q8N328 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD3Q8N328 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.6■□□□□ 0.73
PGBD3Q8N328 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PGBD3Q8N328 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 AC073314.1-201ENST00000568729 2216 ntBASIC19.59■□□□□ 0.73
PGBD3Q8N328 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.59■□□□□ 0.73
PGBD3Q8N328 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PGBD3Q8N328 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD3Q8N328 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD3Q8N328 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.58■□□□□ 0.73
PGBD3Q8N328 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PGBD3Q8N328 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD3Q8N328 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD3Q8N328 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD3Q8N328 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD3Q8N328 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD3Q8N328 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.58■□□□□ 0.73
PGBD3Q8N328 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PGBD3Q8N328 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.58■□□□□ 0.72
PGBD3Q8N328 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.58■□□□□ 0.72
PGBD3Q8N328 AC022616.7-201ENST00000525383 220 ntBASIC19.58■□□□□ 0.72
PGBD3Q8N328 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.58■□□□□ 0.72
PGBD3Q8N328 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD3Q8N328 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
PGBD3Q8N328 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD3Q8N328 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PGBD3Q8N328 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD3Q8N328 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD3Q8N328 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD3Q8N328 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD3Q8N328 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.58■□□□□ 0.72
PGBD3Q8N328 KRT8P8-201ENST00000434750 1448 ntBASIC19.58■□□□□ 0.72
PGBD3Q8N328 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PGBD3Q8N328 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD3Q8N328 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PGBD3Q8N328 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD3Q8N328 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD3Q8N328 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD3Q8N328 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PGBD3Q8N328 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD3Q8N328 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD3Q8N328 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.57■□□□□ 0.72
PGBD3Q8N328 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PGBD3Q8N328 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.57■□□□□ 0.72
PGBD3Q8N328 AC117947.1-201ENST00000427448 529 ntBASIC19.57■□□□□ 0.72
PGBD3Q8N328 AC091390.4-202ENST00000476426 537 ntBASIC19.57■□□□□ 0.72
PGBD3Q8N328 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD3Q8N328 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.57■□□□□ 0.72
PGBD3Q8N328 AC139887.4-201ENST00000607877 719 ntBASIC19.57■□□□□ 0.72
PGBD3Q8N328 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PGBD3Q8N328 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD3Q8N328 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD3Q8N328 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.57■□□□□ 0.72
PGBD3Q8N328 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PGBD3Q8N328 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms