Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.93■■□□□ 1.42
SMC5Q8IY18 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.93■■□□□ 1.42
SMC5Q8IY18 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC5Q8IY18 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
SMC5Q8IY18 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
SMC5Q8IY18 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
SMC5Q8IY18 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.92■■□□□ 1.42
SMC5Q8IY18 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.92■■□□□ 1.42
SMC5Q8IY18 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.92■■□□□ 1.42
SMC5Q8IY18 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.92■■□□□ 1.42
SMC5Q8IY18 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 FEM1AP3-201ENST00000403722 1741 ntBASIC23.92■■□□□ 1.42
SMC5Q8IY18 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.92■■□□□ 1.42
SMC5Q8IY18 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.92■■□□□ 1.42
SMC5Q8IY18 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.92■■□□□ 1.42
SMC5Q8IY18 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC5Q8IY18 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMC5Q8IY18 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMC5Q8IY18 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
SMC5Q8IY18 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.91■■□□□ 1.42
SMC5Q8IY18 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMC5Q8IY18 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.91■■□□□ 1.42
SMC5Q8IY18 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMC5Q8IY18 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.91■■□□□ 1.42
SMC5Q8IY18 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMC5Q8IY18 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMC5Q8IY18 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.91■■□□□ 1.42
SMC5Q8IY18 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.91■■□□□ 1.42
SMC5Q8IY18 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.91■■□□□ 1.42
SMC5Q8IY18 PRKY-204ENST00000533551 1019 ntBASIC23.91■■□□□ 1.42
SMC5Q8IY18 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.91■■□□□ 1.42
SMC5Q8IY18 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMC5Q8IY18 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.91■■□□□ 1.42
SMC5Q8IY18 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.91■■□□□ 1.42
SMC5Q8IY18 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMC5Q8IY18 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMC5Q8IY18 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMC5Q8IY18 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.9■■□□□ 1.42
SMC5Q8IY18 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SMC5Q8IY18 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.9■■□□□ 1.42
SMC5Q8IY18 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMC5Q8IY18 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
SMC5Q8IY18 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SMC5Q8IY18 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SMC5Q8IY18 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.9■■□□□ 1.42
SMC5Q8IY18 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMC5Q8IY18 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMC5Q8IY18 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.9■■□□□ 1.42
SMC5Q8IY18 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMC5Q8IY18 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SMC5Q8IY18 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMC5Q8IY18 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMC5Q8IY18 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SMC5Q8IY18 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SMC5Q8IY18 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SMC5Q8IY18 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
SMC5Q8IY18 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.41
SMC5Q8IY18 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.89■■□□□ 1.41
SMC5Q8IY18 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.89■■□□□ 1.41
SMC5Q8IY18 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.89■■□□□ 1.41
SMC5Q8IY18 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SMC5Q8IY18 AC093525.10-201ENST00000625130 1569 ntBASIC23.89■■□□□ 1.41
SMC5Q8IY18 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SMC5Q8IY18 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.89■■□□□ 1.41
SMC5Q8IY18 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.89■■□□□ 1.41
SMC5Q8IY18 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SMC5Q8IY18 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC23.89■■□□□ 1.41
SMC5Q8IY18 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SMC5Q8IY18 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.88■■□□□ 1.41
SMC5Q8IY18 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.88■■□□□ 1.41
SMC5Q8IY18 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMC5Q8IY18 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMC5Q8IY18 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMC5Q8IY18 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMC5Q8IY18 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMC5Q8IY18 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMC5Q8IY18 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.88■■□□□ 1.41
SMC5Q8IY18 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.88■■□□□ 1.41
SMC5Q8IY18 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms