Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ABCA9Q8IUA7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC29.45■■■□□ 2.31
ABCA9Q8IUA7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
ABCA9Q8IUA7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC29.45■■■□□ 2.3
ABCA9Q8IUA7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ABCA9Q8IUA7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ABCA9Q8IUA7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
ABCA9Q8IUA7 MRPL3P1-201ENST00000400109 1033 ntBASIC29.44■■■□□ 2.3
ABCA9Q8IUA7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
ABCA9Q8IUA7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC29.44■■■□□ 2.3
ABCA9Q8IUA7 GPAT2P1-201ENST00000444924 1672 ntBASIC29.44■■■□□ 2.3
ABCA9Q8IUA7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ABCA9Q8IUA7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC29.44■■■□□ 2.3
ABCA9Q8IUA7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
ABCA9Q8IUA7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ABCA9Q8IUA7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 BID-212ENST00000614949 1988 ntTSL 5 BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC29.43■■■□□ 2.3
ABCA9Q8IUA7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 AF106564.1-201ENST00000607058 2553 ntBASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 AC120114.3-201ENST00000611923 658 ntBASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
ABCA9Q8IUA7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
ABCA9Q8IUA7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
ABCA9Q8IUA7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
ABCA9Q8IUA7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ABCA9Q8IUA7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC29.41■■■□□ 2.3
ABCA9Q8IUA7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC29.41■■■□□ 2.3
ABCA9Q8IUA7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC29.41■■■□□ 2.3
ABCA9Q8IUA7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ABCA9Q8IUA7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC29.41■■■□□ 2.3
ABCA9Q8IUA7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
ABCA9Q8IUA7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ABCA9Q8IUA7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ABCA9Q8IUA7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC29.4■■■□□ 2.3
ABCA9Q8IUA7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
ABCA9Q8IUA7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC29.4■■■□□ 2.3
ABCA9Q8IUA7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC29.4■■■□□ 2.3
ABCA9Q8IUA7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ABCA9Q8IUA7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC29.4■■■□□ 2.3
ABCA9Q8IUA7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ABCA9Q8IUA7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ABCA9Q8IUA7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC29.39■■■□□ 2.3
ABCA9Q8IUA7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
ABCA9Q8IUA7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
ABCA9Q8IUA7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC29.39■■■□□ 2.3
ABCA9Q8IUA7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC29.39■■■□□ 2.3
ABCA9Q8IUA7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ABCA9Q8IUA7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ABCA9Q8IUA7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
ABCA9Q8IUA7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
ABCA9Q8IUA7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
ABCA9Q8IUA7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
ABCA9Q8IUA7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.29
ABCA9Q8IUA7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.29
ABCA9Q8IUA7 WWC2-AS2-201ENST00000578387 2183 ntBASIC29.39■■■□□ 2.29
ABCA9Q8IUA7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC29.39■■■□□ 2.29
ABCA9Q8IUA7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC29.38■■■□□ 2.29
ABCA9Q8IUA7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC29.38■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms