Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.41■□□□□ 0.54
RAB43Q86YS6 AP000525.1-201ENST00000608286 694 ntBASIC18.41■□□□□ 0.54
RAB43Q86YS6 AC010331.1-201ENST00000611423 582 ntBASIC18.41■□□□□ 0.54
RAB43Q86YS6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB43Q86YS6 AL031985.4-201ENST00000642138 673 ntBASIC18.41■□□□□ 0.54
RAB43Q86YS6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB43Q86YS6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB43Q86YS6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RAB43Q86YS6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB43Q86YS6 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB43Q86YS6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB43Q86YS6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB43Q86YS6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB43Q86YS6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RAB43Q86YS6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB43Q86YS6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RAB43Q86YS6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB43Q86YS6 AC026471.1-201ENST00000564629 3026 ntBASIC18.4■□□□□ 0.54
RAB43Q86YS6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB43Q86YS6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB43Q86YS6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RAB43Q86YS6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB43Q86YS6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB43Q86YS6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB43Q86YS6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB43Q86YS6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RAB43Q86YS6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB43Q86YS6 MIR1238-201ENST00000408483 83 ntBASIC18.4■□□□□ 0.54
RAB43Q86YS6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB43Q86YS6 TUBB8P6-201ENST00000436895 1288 ntBASIC18.4■□□□□ 0.54
RAB43Q86YS6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RAB43Q86YS6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB43Q86YS6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB43Q86YS6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB43Q86YS6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB43Q86YS6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RAB43Q86YS6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB43Q86YS6 AC079598.2-202ENST00000546624 1451 ntBASIC18.39■□□□□ 0.54
RAB43Q86YS6 AC018553.1-201ENST00000616682 1458 ntBASIC18.39■□□□□ 0.54
RAB43Q86YS6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB43Q86YS6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RAB43Q86YS6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.39■□□□□ 0.54
RAB43Q86YS6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB43Q86YS6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB43Q86YS6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RAB43Q86YS6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB43Q86YS6 TFP1-202ENST00000475455 1573 ntBASIC18.39■□□□□ 0.53
RAB43Q86YS6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB43Q86YS6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB43Q86YS6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB43Q86YS6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB43Q86YS6 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB43Q86YS6 AC026271.3-201ENST00000571884 352 ntBASIC18.39■□□□□ 0.53
RAB43Q86YS6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB43Q86YS6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB43Q86YS6 MIR6786-201ENST00000616843 113 ntBASIC18.39■□□□□ 0.53
RAB43Q86YS6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
RAB43Q86YS6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB43Q86YS6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB43Q86YS6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB43Q86YS6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB43Q86YS6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB43Q86YS6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB43Q86YS6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB43Q86YS6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB43Q86YS6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB43Q86YS6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB43Q86YS6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RAB43Q86YS6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB43Q86YS6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 NAPSB-206ENST00000562112 1266 ntBASIC18.38■□□□□ 0.53
RAB43Q86YS6 AC145285.6-201ENST00000604632 637 ntBASIC18.38■□□□□ 0.53
RAB43Q86YS6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 AL445675.2-201ENST00000620291 557 ntBASIC18.38■□□□□ 0.53
RAB43Q86YS6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms