Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC239809.2-201ENST00000415381 517 ntBASIC19.27■□□□□ 0.68
LDB1Q86U70 TSPY20P-201ENST00000450910 630 ntBASIC19.27■□□□□ 0.68
LDB1Q86U70 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LDB1Q86U70 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.27■□□□□ 0.68
LDB1Q86U70 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.27■□□□□ 0.68
LDB1Q86U70 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.27■□□□□ 0.68
LDB1Q86U70 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LDB1Q86U70 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
LDB1Q86U70 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LDB1Q86U70 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
LDB1Q86U70 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LDB1Q86U70 AL049812.1-201ENST00000432563 2267 ntBASIC19.27■□□□□ 0.68
LDB1Q86U70 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LDB1Q86U70 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.27■□□□□ 0.67
LDB1Q86U70 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
LDB1Q86U70 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LDB1Q86U70 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LDB1Q86U70 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDB1Q86U70 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDB1Q86U70 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
LDB1Q86U70 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDB1Q86U70 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDB1Q86U70 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDB1Q86U70 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDB1Q86U70 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
LDB1Q86U70 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.26■□□□□ 0.67
LDB1Q86U70 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LDB1Q86U70 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.26■□□□□ 0.67
LDB1Q86U70 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.26■□□□□ 0.67
LDB1Q86U70 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.26■□□□□ 0.67
LDB1Q86U70 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.26■□□□□ 0.67
LDB1Q86U70 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.26■□□□□ 0.67
LDB1Q86U70 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.26■□□□□ 0.67
LDB1Q86U70 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LDB1Q86U70 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LDB1Q86U70 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.26■□□□□ 0.67
LDB1Q86U70 RN7SL471P-201ENST00000580476 299 ntBASIC19.26■□□□□ 0.67
LDB1Q86U70 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.26■□□□□ 0.67
LDB1Q86U70 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.26■□□□□ 0.67
LDB1Q86U70 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
LDB1Q86U70 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
LDB1Q86U70 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.26■□□□□ 0.67
LDB1Q86U70 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.26■□□□□ 0.67
LDB1Q86U70 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDB1Q86U70 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDB1Q86U70 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDB1Q86U70 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.25■□□□□ 0.67
LDB1Q86U70 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.25■□□□□ 0.67
LDB1Q86U70 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.25■□□□□ 0.67
LDB1Q86U70 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.25■□□□□ 0.67
LDB1Q86U70 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LDB1Q86U70 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.25■□□□□ 0.67
LDB1Q86U70 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.25■□□□□ 0.67
LDB1Q86U70 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LDB1Q86U70 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 AC124016.1-201ENST00000609552 612 ntBASIC19.25■□□□□ 0.67
LDB1Q86U70 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.25■□□□□ 0.67
LDB1Q86U70 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.25■□□□□ 0.67
LDB1Q86U70 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LDB1Q86U70 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LDB1Q86U70 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.25■□□□□ 0.67
LDB1Q86U70 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.24■□□□□ 0.67
LDB1Q86U70 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDB1Q86U70 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
LDB1Q86U70 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDB1Q86U70 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.24■□□□□ 0.67
LDB1Q86U70 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDB1Q86U70 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDB1Q86U70 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LDB1Q86U70 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDB1Q86U70 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDB1Q86U70 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDB1Q86U70 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LDB1Q86U70 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LDB1Q86U70 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDB1Q86U70 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDB1Q86U70 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LDB1Q86U70 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LDB1Q86U70 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.24■□□□□ 0.67
LDB1Q86U70 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDB1Q86U70 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
LDB1Q86U70 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
LDB1Q86U70 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.24■□□□□ 0.67
LDB1Q86U70 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.23■□□□□ 0.67
LDB1Q86U70 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.23■□□□□ 0.67
LDB1Q86U70 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB1Q86U70 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LDB1Q86U70 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB1Q86U70 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms