Protein–RNA interactions for Protein: Q7Z5N4

SDK1, Protein sidekick-1, humanhuman

Predictions only

Length 2,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1Q7Z5N4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 PCDHAC2-203ENST00000615316 3011 ntBASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 NPAP1P7-201ENST00000613027 823 ntBASIC19.15■□□□□ 0.66
SDK1Q7Z5N4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.14■□□□□ 0.66
SDK1Q7Z5N4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SDK1Q7Z5N4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.14■□□□□ 0.66
SDK1Q7Z5N4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SDK1Q7Z5N4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.14■□□□□ 0.66
SDK1Q7Z5N4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
SDK1Q7Z5N4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
SDK1Q7Z5N4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.14■□□□□ 0.66
SDK1Q7Z5N4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 AC004263.2-201ENST00000617183 678 ntBASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDK1Q7Z5N4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 SPDYE15P-201ENST00000424157 909 ntBASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 AP000347.1-202ENST00000435868 847 ntBASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 AP000523.1-201ENST00000398242 1049 ntBASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 ATP5G2P1-201ENST00000433580 426 ntBASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 PVRIG2P-201ENST00000435460 978 ntBASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SDK1Q7Z5N4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 CKBP1-201ENST00000565489 1086 ntBASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SDK1Q7Z5N4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms