Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.75□□□□□ -0.37
SCXQ7RTU7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SCXQ7RTU7 FER1L4-210ENST00000615531 5998 ntBASIC12.75□□□□□ -0.37
SCXQ7RTU7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SCXQ7RTU7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCXQ7RTU7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SCXQ7RTU7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCXQ7RTU7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCXQ7RTU7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SCXQ7RTU7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 KRT8P36-201ENST00000489121 1440 ntBASIC12.74□□□□□ -0.37
SCXQ7RTU7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 TSPY7P-201ENST00000431358 1114 ntBASIC12.74□□□□□ -0.37
SCXQ7RTU7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.74□□□□□ -0.37
SCXQ7RTU7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 HES2-206ENST00000489730 730 ntTSL 2 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 AP001412.1-201ENST00000608405 714 ntBASIC12.74□□□□□ -0.37
SCXQ7RTU7 MIR2861-201ENST00000636310 90 ntBASIC12.74□□□□□ -0.37
SCXQ7RTU7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 AC018445.3-201ENST00000624177 1945 ntBASIC12.74□□□□□ -0.37
SCXQ7RTU7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SCXQ7RTU7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCXQ7RTU7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 AC023632.3-201ENST00000521633 145 ntBASIC12.73□□□□□ -0.37
SCXQ7RTU7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 AL049637.2-201ENST00000641778 930 ntBASIC12.73□□□□□ -0.37
SCXQ7RTU7 GABARAPL3-202ENST00000624044 1851 ntBASIC12.73□□□□□ -0.37
SCXQ7RTU7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 AL049796.1-201ENST00000565336 1766 ntBASIC12.73□□□□□ -0.37
SCXQ7RTU7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
SCXQ7RTU7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCXQ7RTU7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms