Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13CQ709C8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13CQ709C8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13CQ709C8 AC006128.1-201ENST00000624704 1661 ntBASIC16.12■□□□□ 0.17
VPS13CQ709C8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13CQ709C8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13CQ709C8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13CQ709C8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13CQ709C8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 PHGDH-210ENST00000641115 1638 ntBASIC16.12■□□□□ 0.17
VPS13CQ709C8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13CQ709C8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VPS13CQ709C8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13CQ709C8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13CQ709C8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13CQ709C8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13CQ709C8 AP002383.4-201ENST00000442518 975 ntBASIC16.11■□□□□ 0.17
VPS13CQ709C8 AP002414.4-201ENST00000589764 1148 ntBASIC16.11■□□□□ 0.17
VPS13CQ709C8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13CQ709C8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13CQ709C8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13CQ709C8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13CQ709C8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13CQ709C8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13CQ709C8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13CQ709C8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
VPS13CQ709C8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13CQ709C8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13CQ709C8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13CQ709C8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.1■□□□□ 0.17
VPS13CQ709C8 MIR3652-201ENST00000579335 131 ntBASIC16.1■□□□□ 0.17
VPS13CQ709C8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.1■□□□□ 0.17
VPS13CQ709C8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS13CQ709C8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS13CQ709C8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13CQ709C8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.1■□□□□ 0.17
VPS13CQ709C8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.1■□□□□ 0.17
VPS13CQ709C8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VPS13CQ709C8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VPS13CQ709C8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VPS13CQ709C8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13CQ709C8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS13CQ709C8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13CQ709C8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13CQ709C8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13CQ709C8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
VPS13CQ709C8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
VPS13CQ709C8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13CQ709C8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13CQ709C8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13CQ709C8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13CQ709C8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 BX119927.1-201ENST00000636596 1552 ntBASIC16.09■□□□□ 0.17
VPS13CQ709C8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13CQ709C8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13CQ709C8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13CQ709C8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13CQ709C8 HBZP1-201ENST00000354915 429 ntBASIC16.09■□□□□ 0.17
VPS13CQ709C8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13CQ709C8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 STARP1-201ENST00000397973 869 ntBASIC16.09■□□□□ 0.17
VPS13CQ709C8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS13CQ709C8 PRELID1P1-202ENST00000567272 903 ntBASIC16.09■□□□□ 0.17
VPS13CQ709C8 SLC25A6P4-201ENST00000586535 553 ntBASIC16.09■□□□□ 0.17
VPS13CQ709C8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms