Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COLCA1Q6ZS62 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 AL353807.1-201ENST00000427475 662 ntBASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COLCA1Q6ZS62 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 KRT8P41-201ENST00000533985 1514 ntBASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 ABHD17AP1-201ENST00000358206 933 ntBASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 KSR1P1-201ENST00000446298 240 ntBASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 AC098590.1-201ENST00000468126 897 ntBASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 Z85996.1-201ENST00000494644 937 ntBASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 AL161938.1-201ENST00000569833 2180 ntBASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.61■□□□□ 0.25
COLCA1Q6ZS62 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 AC004980.1-204ENST00000429707 299 ntBASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 TSPY21P-201ENST00000433481 731 ntBASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 AP002982.1-201ENST00000492365 877 ntBASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.6■□□□□ 0.25
COLCA1Q6ZS62 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms