Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF220Q5VTB9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF220Q5VTB9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF220Q5VTB9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF220Q5VTB9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF220Q5VTB9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF220Q5VTB9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF220Q5VTB9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF220Q5VTB9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF220Q5VTB9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF220Q5VTB9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 AC231657.2-201ENST00000624556 255 ntBASIC18.55■□□□□ 0.56
RNF220Q5VTB9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF220Q5VTB9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 AL691432.2-201ENST00000607222 2038 ntBASIC18.54■□□□□ 0.56
RNF220Q5VTB9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 CYP2T1P-201ENST00000432607 1285 ntBASIC18.54■□□□□ 0.56
RNF220Q5VTB9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 AC069236.1-201ENST00000604339 616 ntBASIC18.54■□□□□ 0.56
RNF220Q5VTB9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 AL354751.1-201ENST00000412768 1863 ntBASIC18.54■□□□□ 0.56
RNF220Q5VTB9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF220Q5VTB9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 BX119927.1-201ENST00000636596 1552 ntBASIC18.53■□□□□ 0.56
RNF220Q5VTB9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF220Q5VTB9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms