Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 TMPOP1-202ENST00000424642 1267 ntBASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 AP000692.2-201ENST00000608391 879 ntBASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 AC005363.2-201ENST00000618631 242 ntBASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
PRAMEF17Q5VTA0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 KRT18P57-201ENST00000443599 1254 ntBASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF17Q5VTA0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PRAMEF17Q5VTA0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.39■□□□□ 0.54
PRAMEF17Q5VTA0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 AL160286.2-201ENST00000567150 934 ntBASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 DGCR10-201ENST00000609839 495 ntBASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF17Q5VTA0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 FAM207BP-201ENST00000447172 505 ntBASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 ECEL1P2-202ENST00000465689 757 ntBASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 AP005242.2-201ENST00000580065 1175 ntBASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 KRT18P22-201ENST00000402024 1347 ntBASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF17Q5VTA0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PRAMEF17Q5VTA0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms