Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PRAMEF20Q5VT98 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF20Q5VT98 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.7■□□□□ 0.42
PRAMEF20Q5VT98 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF20Q5VT98 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 AC087499.1-201ENST00000418141 1075 ntBASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRAMEF20Q5VT98 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 Z85996.1-201ENST00000494644 937 ntBASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 AC133561.5-201ENST00000635547 218 ntBASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PRAMEF20Q5VT98 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 MMP23A-201ENST00000234610 1017 ntBASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 AC211429.1-201ENST00000415277 523 ntBASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 AC004951.3-201ENST00000418645 1148 ntBASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 ECEL1P3-201ENST00000427961 737 ntBASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEF20Q5VT98 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.66■□□□□ 0.42
PRAMEF20Q5VT98 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PRAMEF20Q5VT98 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF20Q5VT98 KRT8P9-201ENST00000558927 1449 ntBASIC17.66■□□□□ 0.42
PRAMEF20Q5VT98 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
PRAMEF20Q5VT98 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms