Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM78BQ5VT40 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM78BQ5VT40 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM78BQ5VT40 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM78BQ5VT40 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FAM78BQ5VT40 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.3■□□□□ 0.04
FAM78BQ5VT40 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM78BQ5VT40 AL133373.2-201ENST00000623187 2828 ntBASIC15.3■□□□□ 0.04
FAM78BQ5VT40 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 AC104581.1-202ENST00000635932 2618 ntBASIC15.29■□□□□ 0.04
FAM78BQ5VT40 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 AC026271.2-201ENST00000428091 497 ntBASIC15.29■□□□□ 0.04
FAM78BQ5VT40 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 CROCCP3-202ENST00000420820 1947 ntBASIC15.29■□□□□ 0.04
FAM78BQ5VT40 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
FAM78BQ5VT40 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 AP000997.3-201ENST00000623333 2250 ntBASIC15.28■□□□□ 0.04
FAM78BQ5VT40 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 KRT18P5-201ENST00000436075 1291 ntBASIC15.28■□□□□ 0.04
FAM78BQ5VT40 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.28■□□□□ 0.04
FAM78BQ5VT40 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms