Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 TSPY14P-201ENST00000303979 915 ntBASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 HMGA1P5-201ENST00000412453 271 ntBASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 AC008040.2-201ENST00000461049 708 ntBASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ARFGEF3Q5TH69 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 SLC25A24-204ENST00000569674 2357 ntBASIC16.4■□□□□ 0.22
ARFGEF3Q5TH69 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
ARFGEF3Q5TH69 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 INGX-201ENST00000359239 846 ntBASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 NTF6B-201ENST00000591913 560 ntBASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 AC104417.2-201ENST00000562989 1793 ntBASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ARFGEF3Q5TH69 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 AC130371.2-201ENST00000619443 611 ntBASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 LINC01521-201ENST00000504184 1943 ntBASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 AK4P3-201ENST00000418260 669 ntBASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ARFGEF3Q5TH69 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms