Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 TSPY5P-201ENST00000426936 936 ntBASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 COX11P1-201ENST00000489116 835 ntBASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 MIR4674-201ENST00000582457 87 ntBASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 KRT18P38-201ENST00000449496 1282 ntBASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHROOM1Q2M3G4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHROOM1Q2M3G4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHROOM1Q2M3G4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms