Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.4■■□□□ 1.34
RFX7Q2KHR2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RFX7Q2KHR2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RFX7Q2KHR2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RFX7Q2KHR2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RFX7Q2KHR2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RFX7Q2KHR2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 AC005521.1-201ENST00000393351 872 ntBASIC23.39■■□□□ 1.33
RFX7Q2KHR2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RFX7Q2KHR2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 PKD1P6-201ENST00000343738 4769 ntBASIC23.38■■□□□ 1.33
RFX7Q2KHR2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 SLC25A3P1-201ENST00000443844 931 ntBASIC23.38■■□□□ 1.33
RFX7Q2KHR2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 AL445228.2-201ENST00000605589 952 ntBASIC23.38■■□□□ 1.33
RFX7Q2KHR2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.38■■□□□ 1.33
RFX7Q2KHR2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 AC005363.2-201ENST00000618631 242 ntBASIC23.37■■□□□ 1.33
RFX7Q2KHR2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFX7Q2KHR2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 AC005332.7-201ENST00000614046 2005 ntBASIC23.36■■□□□ 1.33
RFX7Q2KHR2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 KRT18P57-201ENST00000443599 1254 ntBASIC23.36■■□□□ 1.33
RFX7Q2KHR2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.36■■□□□ 1.33
RFX7Q2KHR2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 RCC2P6-201ENST00000526625 1557 ntBASIC23.35■■□□□ 1.33
RFX7Q2KHR2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RFX7Q2KHR2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms