Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 KRT18P35-201ENST00000510488 1269 ntBASIC23.18■■□□□ 1.3
PDS5AQ29RF7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 AP003041.3-201ENST00000527151 707 ntBASIC23.18■■□□□ 1.3
PDS5AQ29RF7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
PDS5AQ29RF7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDS5AQ29RF7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDS5AQ29RF7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDS5AQ29RF7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PDS5AQ29RF7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PDS5AQ29RF7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PDS5AQ29RF7 AC117947.1-201ENST00000427448 529 ntBASIC23.14■■□□□ 1.3
PDS5AQ29RF7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.14■■□□□ 1.3
PDS5AQ29RF7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
PDS5AQ29RF7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms