Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDR2Q01850 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDR2Q01850 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.58■□□□□ 0.89
CDR2Q01850 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDR2Q01850 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CDR2Q01850 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.58■□□□□ 0.88
CDR2Q01850 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDR2Q01850 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDR2Q01850 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDR2Q01850 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDR2Q01850 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.57■□□□□ 0.88
CDR2Q01850 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDR2Q01850 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDR2Q01850 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDR2Q01850 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
CDR2Q01850 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.57■□□□□ 0.88
CDR2Q01850 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDR2Q01850 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.57■□□□□ 0.88
CDR2Q01850 AL161938.1-201ENST00000569833 2180 ntBASIC20.57■□□□□ 0.88
CDR2Q01850 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDR2Q01850 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CDR2Q01850 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDR2Q01850 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CDR2Q01850 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDR2Q01850 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDR2Q01850 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
CDR2Q01850 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR2Q01850 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CDR2Q01850 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR2Q01850 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR2Q01850 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR2Q01850 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.56■□□□□ 0.88
CDR2Q01850 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR2Q01850 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.56■□□□□ 0.88
CDR2Q01850 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CDR2Q01850 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR2Q01850 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR2Q01850 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.56■□□□□ 0.88
CDR2Q01850 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.56■□□□□ 0.88
CDR2Q01850 AC004264.1-201ENST00000608354 794 ntBASIC20.56■□□□□ 0.88
CDR2Q01850 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDR2Q01850 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDR2Q01850 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDR2Q01850 AL020996.1-203ENST00000536896 2307 ntBASIC20.56■□□□□ 0.88
CDR2Q01850 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR2Q01850 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDR2Q01850 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDR2Q01850 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.56■□□□□ 0.88
CDR2Q01850 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.56■□□□□ 0.88
CDR2Q01850 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CDR2Q01850 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.55■□□□□ 0.88
CDR2Q01850 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CDR2Q01850 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.55■□□□□ 0.88
CDR2Q01850 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDR2Q01850 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR2Q01850 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.55■□□□□ 0.88
CDR2Q01850 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.55■□□□□ 0.88
CDR2Q01850 C1QL1P1-201ENST00000568105 661 ntBASIC20.55■□□□□ 0.88
CDR2Q01850 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.55■□□□□ 0.88
CDR2Q01850 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.55■□□□□ 0.88
CDR2Q01850 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CDR2Q01850 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR2Q01850 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR2Q01850 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR2Q01850 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CDR2Q01850 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.54■□□□□ 0.88
CDR2Q01850 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CDR2Q01850 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.54■□□□□ 0.88
CDR2Q01850 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.54■□□□□ 0.88
CDR2Q01850 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.54■□□□□ 0.88
CDR2Q01850 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.54■□□□□ 0.88
CDR2Q01850 AL023875.1-201ENST00000640777 796 ntBASIC20.54■□□□□ 0.88
CDR2Q01850 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.54■□□□□ 0.88
CDR2Q01850 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CDR2Q01850 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CDR2Q01850 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CDR2Q01850 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.54■□□□□ 0.88
CDR2Q01850 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.54■□□□□ 0.88
CDR2Q01850 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CDR2Q01850 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDR2Q01850 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CDR2Q01850 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.53■□□□□ 0.88
CDR2Q01850 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CDR2Q01850 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms