Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.47■□□□□ 0.71
AP1S1P61966 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP1S1P61966 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.47■□□□□ 0.71
AP1S1P61966 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
AP1S1P61966 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.47■□□□□ 0.71
AP1S1P61966 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP1S1P61966 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.46■□□□□ 0.71
AP1S1P61966 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.46■□□□□ 0.71
AP1S1P61966 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
AP1S1P61966 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP1S1P61966 KRT8P41-201ENST00000533985 1514 ntBASIC19.46■□□□□ 0.71
AP1S1P61966 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.46■□□□□ 0.71
AP1S1P61966 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP1S1P61966 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP1S1P61966 SDHAP1-207ENST00000440850 2000 ntBASIC19.46■□□□□ 0.71
AP1S1P61966 Z82202.1-201ENST00000623446 1880 ntBASIC19.46■□□□□ 0.71
AP1S1P61966 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP1S1P61966 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.46■□□□□ 0.71
AP1S1P61966 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.46■□□□□ 0.71
AP1S1P61966 AC011506.1-201ENST00000474329 610 ntBASIC19.46■□□□□ 0.71
AP1S1P61966 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
AP1S1P61966 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP1S1P61966 DGCR10-201ENST00000609839 495 ntBASIC19.46■□□□□ 0.71
AP1S1P61966 AC011298.2-201ENST00000617989 482 ntBASIC19.46■□□□□ 0.71
AP1S1P61966 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.46■□□□□ 0.71
AP1S1P61966 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP1S1P61966 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.46■□□□□ 0.71
AP1S1P61966 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP1S1P61966 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.46■□□□□ 0.71
AP1S1P61966 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP1S1P61966 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
AP1S1P61966 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP1S1P61966 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP1S1P61966 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP1S1P61966 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
AP1S1P61966 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP1S1P61966 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.45■□□□□ 0.7
AP1S1P61966 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.45■□□□□ 0.7
AP1S1P61966 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AP1S1P61966 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.45■□□□□ 0.7
AP1S1P61966 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.45■□□□□ 0.7
AP1S1P61966 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.45■□□□□ 0.7
AP1S1P61966 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.45■□□□□ 0.7
AP1S1P61966 AC130371.2-201ENST00000619443 611 ntBASIC19.45■□□□□ 0.7
AP1S1P61966 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.45■□□□□ 0.7
AP1S1P61966 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
AP1S1P61966 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP1S1P61966 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.45■□□□□ 0.7
AP1S1P61966 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP1S1P61966 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP1S1P61966 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP1S1P61966 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.44■□□□□ 0.7
AP1S1P61966 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP1S1P61966 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP1S1P61966 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
AP1S1P61966 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP1S1P61966 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.44■□□□□ 0.7
AP1S1P61966 AC091390.4-202ENST00000476426 537 ntBASIC19.44■□□□□ 0.7
AP1S1P61966 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.44■□□□□ 0.7
AP1S1P61966 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP1S1P61966 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
AP1S1P61966 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP1S1P61966 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.44■□□□□ 0.7
AP1S1P61966 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
AP1S1P61966 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
AP1S1P61966 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP1S1P61966 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.43■□□□□ 0.7
AP1S1P61966 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
AP1S1P61966 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
AP1S1P61966 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP1S1P61966 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
AP1S1P61966 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.43■□□□□ 0.7
AP1S1P61966 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP1S1P61966 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
AP1S1P61966 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.43■□□□□ 0.7
AP1S1P61966 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.43■□□□□ 0.7
AP1S1P61966 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.43■□□□□ 0.7
AP1S1P61966 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
AP1S1P61966 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
AP1S1P61966 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.43■□□□□ 0.7
AP1S1P61966 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.43■□□□□ 0.7
AP1S1P61966 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP1S1P61966 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.43■□□□□ 0.7
AP1S1P61966 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP1S1P61966 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP1S1P61966 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP1S1P61966 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP1S1P61966 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.43■□□□□ 0.7
AP1S1P61966 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.43■□□□□ 0.7
AP1S1P61966 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP1S1P61966 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.43■□□□□ 0.7
AP1S1P61966 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.42■□□□□ 0.7
AP1S1P61966 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
AP1S1P61966 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S1P61966 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S1P61966 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.42■□□□□ 0.7
AP1S1P61966 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S1P61966 UNC93B2-201ENST00000285383 730 ntBASIC19.42■□□□□ 0.7
AP1S1P61966 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
AP1S1P61966 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms