Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDC42P60953 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.66■□□□□ 0.42
CDC42P60953 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDC42P60953 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC42P60953 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 KRT18P68-201ENST00000392293 1000 ntBASIC17.66■□□□□ 0.42
CDC42P60953 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC42P60953 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.66■□□□□ 0.42
CDC42P60953 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CDC42P60953 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CDC42P60953 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC42P60953 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.66■□□□□ 0.42
CDC42P60953 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDC42P60953 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC42P60953 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC42P60953 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CDC42P60953 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.66■□□□□ 0.42
CDC42P60953 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42P60953 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.65■□□□□ 0.42
CDC42P60953 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42P60953 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42P60953 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42P60953 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.65■□□□□ 0.42
CDC42P60953 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42P60953 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.65■□□□□ 0.42
CDC42P60953 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42P60953 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42P60953 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CDC42P60953 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42P60953 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42P60953 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42P60953 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDC42P60953 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42P60953 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.65■□□□□ 0.42
CDC42P60953 AC093525.10-201ENST00000625130 1569 ntBASIC17.65■□□□□ 0.42
CDC42P60953 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.65■□□□□ 0.42
CDC42P60953 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC42P60953 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.65■□□□□ 0.42
CDC42P60953 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.64■□□□□ 0.42
CDC42P60953 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CDC42P60953 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.64■□□□□ 0.42
CDC42P60953 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDC42P60953 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42P60953 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDC42P60953 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.64■□□□□ 0.41
CDC42P60953 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42P60953 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CDC42P60953 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.64■□□□□ 0.41
CDC42P60953 RARRES2P4-201ENST00000514074 484 ntBASIC17.64■□□□□ 0.41
CDC42P60953 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.64■□□□□ 0.41
CDC42P60953 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42P60953 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42P60953 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDC42P60953 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42P60953 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDC42P60953 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CDC42P60953 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.64■□□□□ 0.41
CDC42P60953 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC42P60953 AC018553.1-201ENST00000616682 1458 ntBASIC17.63■□□□□ 0.41
CDC42P60953 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.63■□□□□ 0.41
CDC42P60953 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.63■□□□□ 0.41
CDC42P60953 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CDC42P60953 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.63■□□□□ 0.41
CDC42P60953 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.63■□□□□ 0.41
CDC42P60953 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.63■□□□□ 0.41
CDC42P60953 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDC42P60953 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.63■□□□□ 0.41
CDC42P60953 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.63■□□□□ 0.41
CDC42P60953 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDC42P60953 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.63■□□□□ 0.41
CDC42P60953 AC005332.8-201ENST00000622750 2735 ntBASIC17.63■□□□□ 0.41
CDC42P60953 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDC42P60953 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC42P60953 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.62■□□□□ 0.41
CDC42P60953 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC42P60953 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.62■□□□□ 0.41
CDC42P60953 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms