Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.59■□□□□ 0.25
AP3S2P59780 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.59■□□□□ 0.25
AP3S2P59780 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP3S2P59780 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.59■□□□□ 0.25
AP3S2P59780 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.59■□□□□ 0.25
AP3S2P59780 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.59■□□□□ 0.25
AP3S2P59780 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP3S2P59780 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3S2P59780 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.59■□□□□ 0.25
AP3S2P59780 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3S2P59780 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP3S2P59780 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.59■□□□□ 0.25
AP3S2P59780 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.59■□□□□ 0.25
AP3S2P59780 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
AP3S2P59780 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3S2P59780 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP3S2P59780 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP3S2P59780 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.58■□□□□ 0.25
AP3S2P59780 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
AP3S2P59780 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP3S2P59780 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP3S2P59780 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP3S2P59780 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
AP3S2P59780 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
AP3S2P59780 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.58■□□□□ 0.24
AP3S2P59780 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 PHGDH-210ENST00000641115 1638 ntBASIC16.58■□□□□ 0.24
AP3S2P59780 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
AP3S2P59780 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.58■□□□□ 0.24
AP3S2P59780 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP3S2P59780 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
AP3S2P59780 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
AP3S2P59780 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.57■□□□□ 0.24
AP3S2P59780 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.57■□□□□ 0.24
AP3S2P59780 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
AP3S2P59780 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.57■□□□□ 0.24
AP3S2P59780 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.57■□□□□ 0.24
AP3S2P59780 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 DUX4L2-201ENST00000561772 1275 ntBASIC16.57■□□□□ 0.24
AP3S2P59780 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.57■□□□□ 0.24
AP3S2P59780 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.57■□□□□ 0.24
AP3S2P59780 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
AP3S2P59780 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.57■□□□□ 0.24
AP3S2P59780 DUX4L6-201ENST00000626483 1275 ntBASIC16.57■□□□□ 0.24
AP3S2P59780 DUX4L1-201ENST00000627662 1275 ntBASIC16.57■□□□□ 0.24
AP3S2P59780 DUX4L8-201ENST00000629013 1275 ntBASIC16.57■□□□□ 0.24
AP3S2P59780 DUX4L3-201ENST00000630187 1275 ntBASIC16.57■□□□□ 0.24
AP3S2P59780 DUX4L7-201ENST00000630678 1275 ntBASIC16.57■□□□□ 0.24
AP3S2P59780 DUX4L5-201ENST00000630834 1275 ntBASIC16.57■□□□□ 0.24
AP3S2P59780 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.57■□□□□ 0.24
AP3S2P59780 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
AP3S2P59780 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
AP3S2P59780 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
AP3S2P59780 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
AP3S2P59780 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.57■□□□□ 0.24
AP3S2P59780 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP3S2P59780 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.57■□□□□ 0.24
AP3S2P59780 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.56■□□□□ 0.24
AP3S2P59780 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3S2P59780 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
AP3S2P59780 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
AP3S2P59780 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3S2P59780 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
AP3S2P59780 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S2P59780 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3S2P59780 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3S2P59780 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
AP3S2P59780 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms