Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB38P57729 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB38P57729 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB38P57729 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB38P57729 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB38P57729 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB38P57729 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB38P57729 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB38P57729 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB38P57729 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RAB38P57729 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAB38P57729 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB38P57729 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RAB38P57729 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB38P57729 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RAB38P57729 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB38P57729 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAB38P57729 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RAB38P57729 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB38P57729 AL355355.2-201ENST00000442321 338 ntBASIC18.17■□□□□ 0.5
RAB38P57729 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB38P57729 AC026471.5-201ENST00000615068 467 ntBASIC18.17■□□□□ 0.5
RAB38P57729 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB38P57729 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.17■□□□□ 0.5
RAB38P57729 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RAB38P57729 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB38P57729 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAB38P57729 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB38P57729 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RAB38P57729 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RAB38P57729 AC093484.2-201ENST00000580996 2166 ntBASIC18.17■□□□□ 0.5
RAB38P57729 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB38P57729 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB38P57729 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RAB38P57729 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB38P57729 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RAB38P57729 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB38P57729 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
RAB38P57729 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB38P57729 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB38P57729 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RAB38P57729 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB38P57729 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB38P57729 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB38P57729 TSPY7P-201ENST00000431358 1114 ntBASIC18.16■□□□□ 0.5
RAB38P57729 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB38P57729 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB38P57729 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB38P57729 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB38P57729 MIR4785-201ENST00000585005 73 ntBASIC18.16■□□□□ 0.5
RAB38P57729 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.16■□□□□ 0.5
RAB38P57729 MIR6786-201ENST00000616843 113 ntBASIC18.16■□□□□ 0.5
RAB38P57729 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB38P57729 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RAB38P57729 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RAB38P57729 RCC2P6-201ENST00000526625 1557 ntBASIC18.16■□□□□ 0.5
RAB38P57729 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB38P57729 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RAB38P57729 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB38P57729 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RAB38P57729 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB38P57729 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
RAB38P57729 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB38P57729 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB38P57729 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB38P57729 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB38P57729 AC004951.3-201ENST00000418645 1148 ntBASIC18.15■□□□□ 0.5
RAB38P57729 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB38P57729 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB38P57729 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB38P57729 MIR4497-201ENST00000583208 89 ntBASIC18.15■□□□□ 0.5
RAB38P57729 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB38P57729 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB38P57729 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB38P57729 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB38P57729 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB38P57729 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB38P57729 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB38P57729 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB38P57729 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
RAB38P57729 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB38P57729 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB38P57729 FSCN1P1-201ENST00000568912 1481 ntBASIC18.14■□□□□ 0.5
RAB38P57729 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB38P57729 KRT8P41-201ENST00000533985 1514 ntBASIC18.14■□□□□ 0.49
RAB38P57729 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB38P57729 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB38P57729 AIRN-201ENST00000601203 4374 ntBASIC18.14■□□□□ 0.49
RAB38P57729 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB38P57729 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB38P57729 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB38P57729 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB38P57729 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RAB38P57729 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB38P57729 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB38P57729 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB38P57729 B3GAT3P1-201ENST00000471720 806 ntBASIC18.14■□□□□ 0.49
RAB38P57729 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB38P57729 AC116562.2-201ENST00000507042 360 ntBASIC18.14■□□□□ 0.49
RAB38P57729 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms