Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 KRT16P5-201ENST00000455284 522 ntBASIC17.69■□□□□ 0.42
CLDN20P56880 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN20P56880 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLDN20P56880 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CLDN20P56880 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN20P56880 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN20P56880 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.68■□□□□ 0.42
CLDN20P56880 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLDN20P56880 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN20P56880 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 RPS2P4-201ENST00000476944 856 ntBASIC17.68■□□□□ 0.42
CLDN20P56880 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN20P56880 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN20P56880 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.68■□□□□ 0.42
CLDN20P56880 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 Z99916.2-201ENST00000604037 246 ntBASIC17.68■□□□□ 0.42
CLDN20P56880 AC004264.1-201ENST00000608354 794 ntBASIC17.68■□□□□ 0.42
CLDN20P56880 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN20P56880 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.68■□□□□ 0.42
CLDN20P56880 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN20P56880 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLDN20P56880 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN20P56880 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN20P56880 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN20P56880 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN20P56880 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 AC005332.7-201ENST00000614046 2005 ntBASIC17.67■□□□□ 0.42
CLDN20P56880 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN20P56880 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN20P56880 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN20P56880 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN20P56880 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN20P56880 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN20P56880 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN20P56880 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLDN20P56880 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CLDN20P56880 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CLDN20P56880 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.67■□□□□ 0.42
CLDN20P56880 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN20P56880 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN20P56880 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN20P56880 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN20P56880 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN20P56880 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CLDN20P56880 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN20P56880 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN20P56880 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN20P56880 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN20P56880 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN20P56880 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN20P56880 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CLDN20P56880 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN20P56880 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN20P56880 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN20P56880 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN20P56880 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN20P56880 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN20P56880 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CLDN20P56880 YBX1P10-201ENST00000444752 975 ntBASIC17.66■□□□□ 0.42
CLDN20P56880 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN20P56880 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CLDN20P56880 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN20P56880 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms