Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
HCFC1P51610 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.85■□□□□ 0.29
HCFC1P51610 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HCFC1P51610 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC1P51610 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HCFC1P51610 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC1P51610 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC1P51610 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.85■□□□□ 0.29
HCFC1P51610 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.85■□□□□ 0.29
HCFC1P51610 NEK4P2-201ENST00000580004 1012 ntBASIC16.85■□□□□ 0.29
HCFC1P51610 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC1P51610 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC1P51610 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC1P51610 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HCFC1P51610 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCFC1P51610 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.85■□□□□ 0.29
HCFC1P51610 IER3-202ENST00000376377 1350 ntBASIC16.84■□□□□ 0.29
HCFC1P51610 LINC01465-201ENST00000408887 1940 ntBASIC16.84■□□□□ 0.29
HCFC1P51610 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.84■□□□□ 0.29
HCFC1P51610 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
HCFC1P51610 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.84■□□□□ 0.29
HCFC1P51610 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.84■□□□□ 0.29
HCFC1P51610 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HCFC1P51610 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.84■□□□□ 0.29
HCFC1P51610 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.84■□□□□ 0.29
HCFC1P51610 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCFC1P51610 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HCFC1P51610 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCFC1P51610 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCFC1P51610 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HCFC1P51610 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.84■□□□□ 0.29
HCFC1P51610 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.84■□□□□ 0.29
HCFC1P51610 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.84■□□□□ 0.29
HCFC1P51610 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.84■□□□□ 0.29
HCFC1P51610 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.84■□□□□ 0.29
HCFC1P51610 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
HCFC1P51610 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCFC1P51610 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HCFC1P51610 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
HCFC1P51610 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HCFC1P51610 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HCFC1P51610 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
HCFC1P51610 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HCFC1P51610 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.83■□□□□ 0.29
HCFC1P51610 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
HCFC1P51610 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HCFC1P51610 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HCFC1P51610 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HCFC1P51610 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HCFC1P51610 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.83■□□□□ 0.28
HCFC1P51610 HOMER2P1-201ENST00000455653 964 ntBASIC16.83■□□□□ 0.28
HCFC1P51610 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.83■□□□□ 0.28
HCFC1P51610 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
HCFC1P51610 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.83■□□□□ 0.28
HCFC1P51610 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
HCFC1P51610 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.83■□□□□ 0.28
HCFC1P51610 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HCFC1P51610 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HCFC1P51610 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HCFC1P51610 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.83■□□□□ 0.28
HCFC1P51610 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.83■□□□□ 0.28
HCFC1P51610 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HCFC1P51610 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HCFC1P51610 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.82■□□□□ 0.28
HCFC1P51610 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.82■□□□□ 0.28
HCFC1P51610 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.82■□□□□ 0.28
HCFC1P51610 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.82■□□□□ 0.28
HCFC1P51610 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.82■□□□□ 0.28
HCFC1P51610 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HCFC1P51610 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HCFC1P51610 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HCFC1P51610 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.82■□□□□ 0.28
HCFC1P51610 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.82■□□□□ 0.28
HCFC1P51610 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HCFC1P51610 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCFC1P51610 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
HCFC1P51610 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.82■□□□□ 0.28
HCFC1P51610 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.82■□□□□ 0.28
HCFC1P51610 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.82■□□□□ 0.28
HCFC1P51610 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.82■□□□□ 0.28
HCFC1P51610 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.82■□□□□ 0.28
HCFC1P51610 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.82■□□□□ 0.28
HCFC1P51610 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.82■□□□□ 0.28
HCFC1P51610 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.81■□□□□ 0.28
HCFC1P51610 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HCFC1P51610 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms